AKAP13

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
AKAP13	PRKA13, LBC oncogene, p47,Ht31, BRX, AKAP-Lbc, c-lbc, PROTO-LB, HA-3, ARHGEF13	A kinase (PRKA) anchor protein 13	NM_007200	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Anchors cAMP-dependent protein kinase (PKA) and acts as an adapter protein to selectively couple G alpha-13 and Rho. Incomplete annotation in bat.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	81	88	84	59	107	262	67	73	84
Read_Max		R. aegyptiacus	Transcriptome	72	53	44	44	38	63	56	50	61
Read_Max		R. aegyptiacus	Genome	84	46	33	51	36	38	50	64	71
DESeq		H. sapiens	Genome	3789.2	4123.33	3901.81	3736.74	4399.06	12393.04	3516.84	3311.11	4735.31
DESeq		R. aegyptiacus	Transcriptome	1964.41	1646.64	1380.11	1363.51	1479.37	2218.34	1895.43	1305.58	1706.68
DESeq		R. aegyptiacus	Genome	2467.31	1695.77	1793.05	2165.55	2000.11	2743.97	2405.37	1612.06	2106.23

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	3789.2	3736.74	3516.84	-0.02	-0.11	-0.09
7h	4123.33	4399.06	3311.11	0.09	-0.32	-0.41
23h	3901.81	12393.04	4735.31	1.67	0.28	-1.39

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	3789.2	4123.33	3901.81	0.12	0.04	-0.08
Ebov	3736.74	4399.06	12393.04	0.24	1.73	1.49
Marv	3516.84	3311.11	4735.31	-0.09	0.43	0.52

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1964.41	1363.51	1895.43	-0.53	-0.05	0.48
7h	1646.64	1479.37	1305.58	-0.15	-0.33	-0.18
23h	1380.11	2218.34	1706.68	0.68	0.31	-0.38

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1964.41	1646.64	1380.11	-0.25	-0.51	-0.25
Ebov	1363.51	1479.37	2218.34	0.12	0.7	0.58
Marv	1895.43	1305.58	1706.68	-0.54	-0.15	0.39