PLEC

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
PLEC PCN, plectin, PLTN, HD1 plectin NM_000445 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Interlinks intermediate filaments with microtubules and microfilaments and anchors intermediate filaments to desmosomes or hemidesmosomes. Interesting expression profiles for each treatment.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome54 47 61 55 63 174 56 76 63
Read_Max
batR. aegyptiacusTranscriptome 368 291 349 272 337 296 297 331 554
Read_Max
bat_genomeR. aegyptiacusGenome 467 310 349 305 293 218 296 454 719
DESeq
humanH. sapiensGenome 2956.06 3155.47 3791.6 3071.72 2986.16 9453.27 3103.67 3501.36 4775.54
DESeq
batR. aegyptiacusTranscriptome 15320.96 12036.97 22779.0 13476.89 17357.08 14630.55 16368.94 13834.21 22863.26
DESeq
bat_genomeR. aegyptiacusGenome 24857.0 20743.5 31518.49 21035.37 26513.76 23697.11 26400.64 20855.27 34740.83

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 2956.06 3071.72 3103.67 0.06 0.07 0.01
7h 3155.47 2986.16 3501.36 -0.08 0.15 0.23
23h 3791.6 9453.27 4775.54 1.32 0.33 -0.99

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 2956.06 3155.47 3791.6 0.09 0.36 0.26
Ebov 3071.72 2986.16 9453.27 -0.04 1.62 1.66
Marv 3103.67 3501.36 4775.54 0.17 0.62 0.45

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 15320.96 13476.89 16368.94 -0.19 0.1 0.28
7h 12036.97 17357.08 13834.21 0.53 0.2 -0.33
23h 22779.0 14630.55 22863.26 -0.64 0.01 0.64

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 15320.96 12036.97 22779.0 -0.35 0.57 0.92
Ebov 13476.89 17357.08 14630.55 0.37 0.12 -0.25
Marv 16368.94 13834.21 22863.26 -0.24 0.48 0.72