WDR48

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
WDR48	p80,KIAA1449, P80, SPG60	WD repeat domain 48	NM_020839	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Regulator of deubiquitinating complexes. Alternative splicing. Differential expression in humans infected with ebola. Also between human and bats.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	315	240	216	246	409	835	336	368	185
Read_Max		R. aegyptiacus	Transcriptome	224	238	157	238	171	216	129	212	173
Read_Max		R. aegyptiacus	Genome	185	196	118	172	116	104	93	217	168
DESeq		H. sapiens	Genome	2567.4	2637.37	2840.48	2732.94	2986.16	8446.59	2633.49	2540.54	2811.79
DESeq		R. aegyptiacus	Transcriptome	1824.1	1737.41	1822.31	1976.1	1840.75	2096.44	1491.62	1757.52	1571.98
DESeq		R. aegyptiacus	Genome	2416.6	2461.51	2220.4	2444.02	2337.18	2934.56	2146.73	2311.44	2094.24

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	2567.4	2732.94	2633.49	0.09	0.04	-0.05
7h	2637.37	2986.16	2540.54	0.18	-0.05	-0.23
23h	2840.48	8446.59	2811.79	1.57	-0.01	-1.59

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	2567.4	2637.37	2840.48	0.04	0.15	0.11
Ebov	2732.94	2986.16	8446.59	0.13	1.63	1.5
Marv	2633.49	2540.54	2811.79	-0.05	0.09	0.15

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1824.1	1976.1	1491.62	0.12	-0.29	-0.41
7h	1737.41	1840.75	1757.52	0.08	0.02	-0.07
23h	1822.31	2096.44	1571.98	0.2	-0.21	-0.42

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1824.1	1737.41	1822.31	-0.07	-0.0	0.07
Ebov	1976.1	1840.75	2096.44	-0.1	0.09	0.19
Marv	1491.62	1757.52	1571.98	0.24	0.08	-0.16