GIGYF1

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
GIGYF1	GYF1	GRB10 interacting GYF protein 1	NM_022574	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Specific function unclear. Seems to be needed a better annotation in bats.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	85	113	138	103	155	380	154	162	107
Read_Max		R. aegyptiacus	Transcriptome	8	5	8	7	5	7	4	6	6
Read_Max		R. aegyptiacus	Genome	76	61	50	55	41	51	49	82	93
DESeq		H. sapiens	Genome	2473.02	3300.29	3328.95	3104.8	3084.52	9029.54	3254.55	3346.28	2969.46
DESeq		R. aegyptiacus	Transcriptome	43.85	30.95	48.64	37.63	40.42	53.61	29.92	41.48	36.86
DESeq		R. aegyptiacus	Genome	1546.04	1479.46	1632.38	1383.46	1348.29	2019.47	1554.1	1616.02	1654.16

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	2473.02	3104.8	3254.55	0.33	0.4	0.07
7h	3300.29	3084.52	3346.28	-0.1	0.02	0.12
23h	3328.95	9029.54	2969.46	1.44	-0.16	-1.6

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	2473.02	3300.29	3328.95	0.42	0.43	0.01
Ebov	3104.8	3084.52	9029.54	-0.01	1.54	1.55
Marv	3254.55	3346.28	2969.46	0.04	-0.13	-0.17

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	43.85	37.63	29.92	-0.22	-0.55	-0.33
7h	30.95	40.42	41.48	0.39	0.42	0.04
23h	48.64	53.61	36.86	0.14	-0.4	-0.54

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	43.85	30.95	48.64	-0.5	0.15	0.65
Ebov	37.63	40.42	53.61	0.1	0.51	0.41
Marv	29.92	41.48	36.86	0.47	0.3	-0.17