YTHDC1

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
YTHDC1	YT521, KIAA1966, YT521-B	YTH domain containing 1	NM_133370	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Function unknown related to splicing factors. Differential expression for Ebola infected cells. Differential alternative splicing expression

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	249	427	482	390	768	1220	474	653	428
Read_Max		R. aegyptiacus	Transcriptome	309	318	249	266	221	255	177	250	183
Read_Max		R. aegyptiacus	Genome	347	283	220	315	185	145	156	310	230
DESeq		H. sapiens	Genome	4637.56	5919.32	6367.98	6105.94	7177.73	17426.44	5972.13	6020.11	5803.08
DESeq		R. aegyptiacus	Transcriptome	2412.2	2456.3	2530.8	2216.0	2089.34	2582.76	2077.86	2225.98	1839.64
DESeq		R. aegyptiacus	Genome	3304.35	3189.83	3451.1	3421.63	3041.46	3822.24	2962.02	3104.38	2619.95

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	4637.56	6105.94	5972.13	0.4	0.36	-0.03
7h	5919.32	7177.73	6020.11	0.28	0.02	-0.25
23h	6367.98	17426.44	5803.08	1.45	-0.13	-1.59

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	4637.56	5919.32	6367.98	0.35	0.46	0.11
Ebov	6105.94	7177.73	17426.44	0.23	1.51	1.28
Marv	5972.13	6020.11	5803.08	0.01	-0.04	-0.05

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	2412.2	2216.0	2077.86	-0.12	-0.22	-0.09
7h	2456.3	2089.34	2225.98	-0.23	-0.14	0.09
23h	2530.8	2582.76	1839.64	0.03	-0.46	-0.49

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	2412.2	2456.3	2530.8	0.03	0.07	0.04
Ebov	2216.0	2089.34	2582.76	-0.08	0.22	0.31
Marv	2077.86	2225.98	1839.64	0.1	-0.18	-0.28