BRD2

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
BRD2 KIAA9001, RING3, D6S113E, NAT, FSRG1 bromodomain containing 2 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

This protein associates with transcription complexes and with acetylated chromatin during mitosis. Have an expression difference in marburg infected cells.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome325 361 343 325 418 1132 431 446 367
Read_Max
batR. aegyptiacusTranscriptome 395 409 409 293 273 375 184 335 461
Read_Max
bat_genomeR. aegyptiacusGenome 657 583 550 604 367 381 261 755 786
DESeq
humanH. sapiensGenome 7402.86 7533.78 6373.94 7377.8 6859.87 19179.25 7651.98 8144.78 7040.48
DESeq
batR. aegyptiacusTranscriptome 2429.85 2661.44 3383.44 2482.46 1982.02 3303.91 1706.32 2202.85 2719.59
DESeq
bat_genomeR. aegyptiacusGenome 8548.35 8438.68 11607.44 10271.8 7574.08 10757.88 6177.05 7682.06 9252.86

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 7402.86 7377.8 7651.98 -0.0 0.05 0.05
7h 7533.78 6859.87 8144.78 -0.14 0.11 0.25
23h 6373.94 19179.25 7040.48 1.59 0.14 -1.45

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 7402.86 7533.78 6373.94 0.03 -0.22 -0.24
Ebov 7377.8 6859.87 19179.25 -0.11 1.38 1.48
Marv 7651.98 8144.78 7040.48 0.09 -0.12 -0.21

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 2429.85 2482.46 1706.32 0.03 -0.51 -0.54
7h 2661.44 1982.02 2202.85 -0.43 -0.27 0.15
23h 3383.44 3303.91 2719.59 -0.03 -0.32 -0.28

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 2429.85 2661.44 3383.44 0.13 0.48 0.35
Ebov 2482.46 1982.02 3303.91 -0.32 0.41 0.74
Marv 1706.32 2202.85 2719.59 0.37 0.67 0.3