KRT8

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
KRT8	CK-8, K8,CARD2, CK8, CYK8, K2C8, KO	keratin 8, type II	NM_002273	pdf			NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Together with KRT19, helps to link the contractile apparatus to dystrophin at the costameres of striated muscle. The annotation and exons distribution seems odd.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	1751	2046	960	2149	2038	3274	2872	3046	1919
Read_Max		R. aegyptiacus	Transcriptome	1034	1088	1308	1545	1215	1311	802	1402	2339
Read_Max		R. aegyptiacus	Genome	4901	4214	4383	4486	2838	2439	2042	5215	9263
DESeq		H. sapiens	Genome	13125.24	13067.61	6066.17	14131.78	10420.59	18040.98	14743.3	13274.21	13125.28
DESeq		R. aegyptiacus	Transcriptome	7568.15	8040.41	12299.43	8512.14	7874.7	9282.25	6529.71	8025.14	14213.27
DESeq		R. aegyptiacus	Genome	27257.27	29053.5	39756.28	32789.39	27024.95	31013.93	22153.28	26176.73	47176.16

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	13125.24	14131.78	14743.3	0.11	0.17	0.06
7h	13067.61	10420.59	13274.21	-0.33	0.02	0.35
23h	6066.17	18040.98	13125.28	1.57	1.11	-0.46

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	13125.24	13067.61	6066.17	-0.01	-1.11	-1.11
Ebov	14131.78	10420.59	18040.98	-0.44	0.35	0.79
Marv	14743.3	13274.21	13125.28	-0.15	-0.17	-0.02

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	7568.15	8512.14	6529.71	0.17	-0.21	-0.38
7h	8040.41	7874.7	8025.14	-0.03	-0.0	0.03
23h	12299.43	9282.25	14213.27	-0.41	0.21	0.61

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	7568.15	8040.41	12299.43	0.09	0.7	0.61
Ebov	8512.14	7874.7	9282.25	-0.11	0.12	0.24
Marv	6529.71	8025.14	14213.27	0.3	1.12	0.82