TNRC18

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
TNRC18	CAGL79, TNRC18A, KIAA1856	trinucleotide repeat containing 18		pdf			NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Function unknown. Interesting differential expression for infected cells. Differential/alternative splicing.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	111	101	109	89	134	327	111	121	110
Read_Max		R. aegyptiacus	Transcriptome	143	111	114	109	115	119	91	147	165
Read_Max		R. aegyptiacus	Genome	166	119	107	119	102	73	92	216	207
DESeq		H. sapiens	Genome	4466.06	4376.25	4412.12	4205.56	4101.52	12062.74	4110.7	4535.72	4602.65
DESeq		R. aegyptiacus	Transcriptome	2721.37	2690.48	3071.94	2970.51	3414.4	2064.36	2855.43	3050.54	3254.04
DESeq		R. aegyptiacus	Genome	4260.0	4466.68	4296.86	4315.3	5038.23	3411.04	4462.14	4457.94	4768.13

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	4466.06	4205.56	4110.7	-0.09	-0.12	-0.03
7h	4376.25	4101.52	4535.72	-0.09	0.05	0.15
23h	4412.12	12062.74	4602.65	1.45	0.06	-1.39

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	4466.06	4376.25	4412.12	-0.03	-0.02	0.01
Ebov	4205.56	4101.52	12062.74	-0.04	1.52	1.56
Marv	4110.7	4535.72	4602.65	0.14	0.16	0.02

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	2721.37	2970.51	2855.43	0.13	0.07	-0.06
7h	2690.48	3414.4	3050.54	0.34	0.18	-0.16
23h	3071.94	2064.36	3254.04	-0.57	0.08	0.66

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	2721.37	2690.48	3071.94	-0.02	0.17	0.19
Ebov	2970.51	3414.4	2064.36	0.2	-0.53	-0.73
Marv	2855.43	3050.54	3254.04	0.1	0.19	0.09