POLR2A

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
POLR2A	Polymerase II,POLRA, RPB1	polymerase (RNA) II (DNA directed) polypeptide A, 220kDa	NM_000937	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Polymerase II gene. Interesting alternative splicing profiles. Expression pattern seem different within treatments.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	403	407	255	340	409	803	459	574	230
Read_Max		R. aegyptiacus	Transcriptome	229	170	220	190	168	220	114	209	249
Read_Max		R. aegyptiacus	Genome	225	186	173	161	143	122	94	259	270
DESeq		H. sapiens	Genome	13824.43	13694.83	8531.35	13180.45	10710.0	22490.11	13808.2	13545.99	7603.73
DESeq		R. aegyptiacus	Transcriptome	5430.83	4846.25	6089.14	4618.72	3952.08	5056.74	3561.81	4360.08	4162.86
DESeq		R. aegyptiacus	Genome	5543.07	4637.35	5765.22	5263.29	4003.57	5166.81	3618.74	4277.15	4120.85

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	13824.43	13180.45	13808.2	-0.07	-0.0	0.07
7h	13694.83	10710.0	13545.99	-0.35	-0.02	0.34
23h	8531.35	22490.11	7603.73	1.4	-0.17	-1.56

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	13824.43	13694.83	8531.35	-0.01	-0.7	-0.68
Ebov	13180.45	10710.0	22490.11	-0.3	0.77	1.07
Marv	13808.2	13545.99	7603.73	-0.03	-0.86	-0.83

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	5430.83	4618.72	3561.81	-0.23	-0.61	-0.37
7h	4846.25	3952.08	4360.08	-0.29	-0.15	0.14
23h	6089.14	5056.74	4162.86	-0.27	-0.55	-0.28

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	5430.83	4846.25	6089.14	-0.16	0.17	0.33
Ebov	4618.72	3952.08	5056.74	-0.22	0.13	0.36
Marv	3561.81	4360.08	4162.86	0.29	0.22	-0.07