TCF12

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
TCF12	HEB, HTF4, HsT17266, bHLHb20	transcription factor 12	NM_003205	pdf	NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The protein encoded by this gene is a member of the basic helix-loop-helix (bHLH) E-protein family that recognizes the consensus binding site (E-box) CANNTG. Big locus. Might have a differential expression during Ebola infection.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	202	277	256	265	390	590	302	351	239
Read_Max		R. aegyptiacus	Transcriptome	593	437	369	505	411	639	445	553	508
Read_Max		R. aegyptiacus	Genome	631	511	311	425	350	365	382	663	555
DESeq		H. sapiens	Genome	3769.92	4005.02	3348.8	3330.65	3859.26	9782.25	3347.54	3574.9	3372.86
DESeq		R. aegyptiacus	Transcriptome	5128.38	4436.88	3716.91	4881.51	4624.47	5285.14	5065.78	4498.05	3642.41
DESeq		R. aegyptiacus	Genome	9476.49	9024.63	7455.63	8637.52	8956.97	9915.89	9439.32	8326.73	7446.3

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	3769.92	3330.65	3347.54	-0.18	-0.17	0.01
7h	4005.02	3859.26	3574.9	-0.05	-0.16	-0.11
23h	3348.8	9782.25	3372.86	1.55	0.01	-1.54

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	3769.92	4005.02	3348.8	0.09	-0.17	-0.26
Ebov	3330.65	3859.26	9782.25	0.21	1.55	1.34
Marv	3347.54	3574.9	3372.86	0.09	0.01	-0.08

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	5128.38	4881.51	5065.78	-0.07	-0.02	0.05
7h	4436.88	4624.47	4498.05	0.06	0.02	-0.04
23h	3716.91	5285.14	3642.41	0.51	-0.03	-0.54

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	5128.38	4436.88	3716.91	-0.21	-0.46	-0.26
Ebov	4881.51	4624.47	5285.14	-0.08	0.11	0.19
Marv	5065.78	4498.05	3642.41	-0.17	-0.48	-0.3