RANGAP1

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
RANGAP1	Fug1, KIAA1835	Ran GTPase activating protein 1	NM_002883	pdf				NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

GTPase activator for the nuclear Ras-related regulatory protein Ran, converting it to the putatively inactive GDP-bound state. Alternative splicing. Interesting expression change in infected cells.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	191	288	261	207	337	707	265	443	273
Read_Max		R. aegyptiacus	Transcriptome	192	200	100	138	157	160	143	142	141
Read_Max		R. aegyptiacus	Genome	NA	NA	NA	NA	NA	NA	NA	NA	NA
DESeq		H. sapiens	Genome	3968.82	4810.72	3806.5	4083.5	4532.39	11144.23	4161.58	5487.74	4410.19
DESeq		R. aegyptiacus	Transcriptome	1320.02	1420.63	762.02	1032.04	1235.17	1181.53	1222.42	1076.72	977.17
DESeq		R. aegyptiacus	Genome	NA	NA	NA	NA	NA	NA	NA	NA	NA

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	3968.82	4083.5	4161.58	0.04	0.07	0.03
7h	4810.72	4532.39	5487.74	-0.09	0.19	0.28
23h	3806.5	11144.23	4410.19	1.55	0.21	-1.34

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	3968.82	4810.72	3806.5	0.28	-0.06	-0.34
Ebov	4083.5	4532.39	11144.23	0.15	1.45	1.3
Marv	4161.58	5487.74	4410.19	0.4	0.08	-0.32

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1320.02	1032.04	1222.42	-0.36	-0.11	0.24
7h	1420.63	1235.17	1076.72	-0.2	-0.4	-0.2
23h	762.02	1181.53	977.17	0.63	0.36	-0.27

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1320.02	1420.63	762.02	0.11	-0.79	-0.9
Ebov	1032.04	1235.17	1181.53	0.26	0.2	-0.06
Marv	1222.42	1076.72	977.17	-0.18	-0.32	-0.14