ME1

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
ME1 NADP-PE malic enzyme 1, NADP(+)-dependent, cytosolic pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

This gene encodes a cytosolic, NADP-dependent enzyme that generates NADPH for fatty acid biosynthesis. Differential/alternative splicing.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome418 427 468 392 626 460 464 876 907
Read_Max
batR. aegyptiacusTranscriptome 839 735 502 761 661 526 616 879 776
Read_Max
bat_genomeR. aegyptiacusGenome 916 787 431 720 548 304 534 1068 813
DESeq
humanH. sapiensGenome 4024.63 4618.98 4651.39 4179.32 4944.55 3848.76 4323.87 6749.12 11274.61
DESeq
batR. aegyptiacusTranscriptome 4599.93 4469.56 3719.36 4654.43 4533.58 3319.31 4792.13 4452.61 4052.65
DESeq
bat_genomeR. aegyptiacusGenome 5872.21 5612.1 4506.63 6145.11 5427.76 3988.03 6159.06 5397.58 4697.07

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 4024.63 4179.32 4323.87 0.05 0.1 0.05
7h 4618.98 4944.55 6749.12 0.1 0.55 0.45
23h 4651.39 3848.76 11274.61 -0.27 1.28 1.55

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 4024.63 4618.98 4651.39 0.2 0.21 0.01
Ebov 4179.32 4944.55 3848.76 0.24 -0.12 -0.36
Marv 4323.87 6749.12 11274.61 0.64 1.38 0.74

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 4599.93 4654.43 4792.13 0.02 0.06 0.04
7h 4469.56 4533.58 4452.61 0.02 -0.01 -0.03
23h 3719.36 3319.31 4052.65 -0.16 0.12 0.29

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 4599.93 4469.56 3719.36 -0.04 -0.31 -0.27
Ebov 4654.43 4533.58 3319.31 -0.04 -0.49 -0.45
Marv 4792.13 4452.61 4052.65 -0.11 -0.24 -0.14