RBM33

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
RBM33	PRR8,DKFZp686F102, MGC20460, DKFZp434D1319	RNA binding motif protein 33	NM_001008408	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The RNA binding motif protein 33 is involved in poly(A) RNA binding. It seems to be slightly upregulated with the time in humans with ebola infection. Stable in bats.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	115	119	161	124	181	444	131	136	153
Read_Max		R. aegyptiacus	Transcriptome	229	167	137	179	121	232	154	215	201
Read_Max		R. aegyptiacus	Genome	248	172	106	165	106	131	126	259	213
DESeq		H. sapiens	Genome	3306.16	3555.26	4539.2	3608.98	4082.01	10366.52	3127.36	3500.56	3857.82
DESeq		R. aegyptiacus	Transcriptome	1940.88	1737.41	1764.9	1623.56	1709.34	2448.03	1640.69	1628.63	1822.14
DESeq		R. aegyptiacus	Genome	2354.73	1921.2	2207.01	2146.79	2113.96	2883.65	2069.14	2068.8	2243.22

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	3306.16	3608.98	3127.36	0.13	-0.08	-0.21
7h	3555.26	4082.01	3500.56	0.2	-0.02	-0.22
23h	4539.2	10366.52	3857.82	1.19	-0.23	-1.43

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	3306.16	3555.26	4539.2	0.1	0.46	0.35
Ebov	3608.98	4082.01	10366.52	0.18	1.52	1.34
Marv	3127.36	3500.56	3857.82	0.16	0.3	0.14

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1940.88	1623.56	1640.69	-0.26	-0.24	0.02
7h	1737.41	1709.34	1628.63	-0.02	-0.09	-0.07
23h	1764.9	2448.03	1822.14	0.47	0.05	-0.43

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1940.88	1737.41	1764.9	-0.16	-0.14	0.02
Ebov	1623.56	1709.34	2448.03	0.07	0.59	0.52
Marv	1640.69	1628.63	1822.14	-0.01	0.15	0.16