ZC3H7B

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
ZC3H7B RoXaN, FLJ13787, DKFZp434K0920, KIAA1031 zinc finger CCCH-type containing 7B NM_017590 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The zinc finger CCCH-type containing 7B gene is involved in the viral process in the host-virus interaction, as metal (Zinc) ion binding. It seems to be upregulated after 7 hours of Marburg virus in humans and then after 23 hours downregulated. In bats, it seems to be upregulated with the time during Marburg virus infection.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome157 207 145 177 225 448 186 314 111
Read_Max
batR. aegyptiacusTranscriptome 371 328 283 265 232 206 199 267 401
Read_Max
bat_genomeR. aegyptiacusGenome 455 379 272 338 225 182 205 444 524
DESeq
humanH. sapiensGenome 5000.85 4798.48 3833.3 4928.75 3943.0 10059.91 4524.75 5167.2 3540.31
DESeq
batR. aegyptiacusTranscriptome 5191.39 4302.54 5466.16 4745.08 4274.04 3379.62 3762.04 3926.32 5248.38
DESeq
bat_genomeR. aegyptiacusGenome 10593.7 8863.08 10598.77 9242.85 8612.09 7337.71 7866.1 7856.51 10852.23

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 5000.85 4928.75 4524.75 -0.02 -0.14 -0.12
7h 4798.48 3943.0 5167.2 -0.28 0.11 0.39
23h 3833.3 10059.91 3540.31 1.39 -0.11 -1.51

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 5000.85 4798.48 3833.3 -0.06 -0.38 -0.32
Ebov 4928.75 3943.0 10059.91 -0.32 1.03 1.35
Marv 4524.75 5167.2 3540.31 0.19 -0.35 -0.55

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 5191.39 4745.08 3762.04 -0.13 -0.46 -0.33
7h 4302.54 4274.04 3926.32 -0.01 -0.13 -0.12
23h 5466.16 3379.62 5248.38 -0.69 -0.06 0.64

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 5191.39 4302.54 5466.16 -0.27 0.07 0.35
Ebov 4745.08 4274.04 3379.62 -0.15 -0.49 -0.34
Marv 3762.04 3926.32 5248.38 0.06 0.48 0.42