UTRN

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
UTRN DMDL, DRP, DRP1,DRP utrophin pdf NONE NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The utrophin gene is involved in protein kinase, actin, vinculin, integrin, calcium and zinc ions binding, aging, muscle cell differentiation, regulation of cellular response to growth factor stimulus. It may play a role in anchoring the cytoskeleton to the plasma membrane.

No particular differential expression pattern was found in the samples analyzed.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome165 162 182 119 258 479 160 198 156
Read_Max
batR. aegyptiacusTranscriptome 369 237 192 336 328 319 273 329 299
Read_Max
bat_genomeR. aegyptiacusGenome NA NA NA NA NA NA NA NA NA
DESeq
humanH. sapiensGenome 7612.92 8188.54 9339.51 6954.6 9072.72 19602.98 6584.42 6714.74 8122.39
DESeq
batR. aegyptiacusTranscriptome 12123.39 9608.9 9212.61 12854.24 12892.4 13510.34 12286.41 10755.76 10120.51
DESeq
bat_genomeR. aegyptiacusGenome NA NA NA NA NA NA NA NA NA

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 7612.92 6954.6 6584.42 -0.13 -0.21 -0.08
7h 8188.54 9072.72 6714.74 0.15 -0.29 -0.43
23h 9339.51 19602.98 8122.39 1.07 -0.2 -1.27

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 7612.92 8188.54 9339.51 0.11 0.29 0.19
Ebov 6954.6 9072.72 19602.98 0.38 1.5 1.11
Marv 6584.42 6714.74 8122.39 0.03 0.3 0.27

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 12123.39 12854.24 12286.41 0.08 0.02 -0.07
7h 9608.9 12892.4 10755.76 0.42 0.16 -0.26
23h 9212.61 13510.34 10120.51 0.55 0.14 -0.42

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 12123.39 9608.9 9212.61 -0.34 -0.4 -0.06
Ebov 12854.24 12892.4 13510.34 0.0 0.07 0.07
Marv 12286.41 10755.76 10120.51 -0.19 -0.28 -0.09