PSMA1

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
PSMA1	HC2, MGC14542, MGC14575, MGC14751, MGC1667, MGC21459, MGC22853, MGC23915, NU, PROS30	proteasome (prosome, macropain) subunit, alpha type, 1	NM_002786	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1 (PSMA1) mRNA seems do be not considerably altered due to Ebola or Marburg virus infection.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	598	769	791	683	1248	840	851	1085	800
Read_Max		R. aegyptiacus	Transcriptome	NA	NA	NA	NA	NA	NA	NA	NA	NA
Read_Max		R. aegyptiacus	Genome	818	794	377	737	579	322	590	1144	786
DESeq		H. sapiens	Genome	4109.87	4050.92	4167.88	4182.74	4700.67	3103.94	4188.78	4376.64	4636.36
DESeq		R. aegyptiacus	Transcriptome	NA	NA	NA	NA	NA	NA	NA	NA	NA
DESeq		R. aegyptiacus	Genome	2862.63	3177.97	2441.32	3210.31	3357.33	2648.68	3472.56	3395.39	2705.57

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	4109.87	4182.74	4188.78	0.03	0.03	0.0
7h	4050.92	4700.67	4376.64	0.21	0.11	-0.1
23h	4167.88	3103.94	4636.36	-0.43	0.15	0.58

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	4109.87	4050.92	4167.88	-0.02	0.02	0.04
Ebov	4182.74	4700.67	3103.94	0.17	-0.43	-0.6
Marv	4188.78	4376.64	4636.36	0.06	0.15	0.08

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	NA	NA	NA	NA	NA	NA
7h	NA	NA	NA	NA	NA	NA
23h	NA	NA	NA	NA	NA	NA

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	NA	NA	NA	NA	NA	NA
Ebov	NA	NA	NA	NA	NA	NA
Marv	NA	NA	NA	NA	NA	NA