CSF1

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
CSF1 NM_172210, NP_757349, P09603-2, uc021ori.1,M-CSF, MCSF, MGC31930 colony stimulating factor 1 (macrophage) NM_000757 pdf

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Description

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome49 52 59 52 52 210 65 108 94
Read_Max
batR. aegyptiacusTranscriptome 453 439 456 332 316 570 297 393 1027
Read_Max
bat_genomeR. aegyptiacusGenome 858 628 689 823 480 552 417 924 1805
DESeq
humanH. sapiensGenome 494.19 575.19 501.38 582.75 503.4 1945.93 629.08 973.81 1126.4
DESeq
batR. aegyptiacusTranscriptome 2661.72 3314.98 3902.59 2647.28 2652.21 4103.33 2695.25 2509.37 5902.66
DESeq
bat_genomeR. aegyptiacusGenome 10414.09 10152.71 14624.5 12992.32 10729.39 15529.16 10870.85 10170.33 21434.76

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 494.19 582.75 629.08 0.24 0.35 0.11
7h 575.19 503.4 973.81 -0.19 0.76 0.95
23h 501.38 1945.93 1126.4 1.96 1.17 -0.79

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 494.19 575.19 501.38 0.22 0.02 -0.2
Ebov 582.75 503.4 1945.93 -0.21 1.74 1.95
Marv 629.08 973.81 1126.4 0.63 0.84 0.21

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 2661.72 2647.28 2695.25 -0.01 0.02 0.03
7h 3314.98 2652.21 2509.37 -0.32 -0.4 -0.08
23h 3902.59 4103.33 5902.66 0.07 0.6 0.52

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 2661.72 3314.98 3902.59 0.32 0.55 0.24
Ebov 2647.28 2652.21 4103.33 0.0 0.63 0.63
Marv 2695.25 2509.37 5902.66 -0.1 1.13 1.23