CSF1

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
CSF1	NM_172210, NP_757349, P09603-2, uc021ori.1,M-CSF, MCSF, MGC31930	colony stimulating factor 1 (macrophage)	NM_000757	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	49	52	59	52	52	210	65	108	94
Read_Max		R. aegyptiacus	Transcriptome	453	439	456	332	316	570	297	393	1027
Read_Max		R. aegyptiacus	Genome	858	628	689	823	480	552	417	924	1805
DESeq		H. sapiens	Genome	494.19	575.19	501.38	582.75	503.4	1945.93	629.08	973.81	1126.4
DESeq		R. aegyptiacus	Transcriptome	2661.72	3314.98	3902.59	2647.28	2652.21	4103.33	2695.25	2509.37	5902.66
DESeq		R. aegyptiacus	Genome	10414.09	10152.71	14624.5	12992.32	10729.39	15529.16	10870.85	10170.33	21434.76

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	494.19	582.75	629.08	0.24	0.35	0.11
7h	575.19	503.4	973.81	-0.19	0.76	0.95
23h	501.38	1945.93	1126.4	1.96	1.17	-0.79

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	494.19	575.19	501.38	0.22	0.02	-0.2
Ebov	582.75	503.4	1945.93	-0.21	1.74	1.95
Marv	629.08	973.81	1126.4	0.63	0.84	0.21

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	2661.72	2647.28	2695.25	-0.01	0.02	0.03
7h	3314.98	2652.21	2509.37	-0.32	-0.4	-0.08
23h	3902.59	4103.33	5902.66	0.07	0.6	0.52

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	2661.72	3314.98	3902.59	0.32	0.55	0.24
Ebov	2647.28	2652.21	4103.33	0.0	0.63	0.63
Marv	2695.25	2509.37	5902.66	-0.1	1.13	1.23