ADAR

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
ADAR ADAR1 adenosine deaminase, RNA-specific NM_001111 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

This gene encodes the enzyme responsible for RNA editing by site-specificdeamination of adenosines. This enzyme destabilizes double-stranded RNAthrough conversion of adenosine to inosine. Mutations in this gene have beenassociated with dyschromatosis symmetrica hereditaria. Alternative splicingresults in multiple transcript variants.

This gene shows no obvious irregularities.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome1008 1041 956 982 1320 660 1241 1329 748
Read_Max
batR. aegyptiacusTranscriptome 164 118 123 113 97 114 104 122 150
Read_Max
bat_genomeR. aegyptiacusGenome 190 121 111 113 83 67 89 148 155
DESeq
humanH. sapiensGenome 30070.15 30192.3 28008.58 29097.54 29617.61 17850.17 29108.41 28705.67 24756.63
DESeq
batR. aegyptiacusTranscriptome 2156.8 2100.49 2229.08 1971.52 2092.62 2059.22 1934.36 2073.96 2284.86
DESeq
bat_genomeR. aegyptiacusGenome 3013.88 2688.77 2860.85 3136.25 2965.57 2913.68 2828.2 2755.49 3091.71

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 30070.15 29097.54 29108.41 -0.05 -0.05 0.0
7h 30192.3 29617.61 28705.67 -0.03 -0.07 -0.05
23h 28008.58 17850.17 24756.63 -0.65 -0.18 0.47

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 30070.15 30192.3 28008.58 0.01 -0.1 -0.11
Ebov 29097.54 29617.61 17850.17 0.03 -0.7 -0.73
Marv 29108.41 28705.67 24756.63 -0.02 -0.23 -0.21

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 2156.8 1971.52 1934.36 -0.13 -0.16 -0.03
7h 2100.49 2092.62 2073.96 -0.01 -0.02 -0.01
23h 2229.08 2059.22 2284.86 -0.11 0.04 0.15

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 2156.8 2100.49 2229.08 -0.04 0.05 0.09
Ebov 1971.52 2092.62 2059.22 0.09 0.06 -0.02
Marv 1934.36 2073.96 2284.86 0.1 0.24 0.14