IFIH1

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
IFIH1 MDA-5, Hlcd, MDA5, IDDM19 interferon induced with helicase C domain 1 NM_022168 pdf

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Description

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome2 3 2 2 4 5 2 2 4
Read_Max
batR. aegyptiacusTranscriptome 5 8 11 3 14 9 5 16 15
Read_Max
bat_genomeR. aegyptiacusGenome 6 5 9 5 5 5 4 10 15
DESeq
humanH. sapiensGenome 13.18 13.24 9.94 6.7 9.13 24.69 9.77 8.19 16.22
DESeq
batR. aegyptiacusTranscriptome 29.56 34.58 93.84 27.55 56.85 81.84 43.27 42.31 126.08
DESeq
bat_genomeR. aegyptiacusGenome 26.64 34.68 84.8 39.5 53.57 95.29 44.98 36.48 130.14

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 13.18 6.7 9.77 -0.98 -0.43 0.54
7h 13.24 9.13 8.19 -0.54 -0.69 -0.16
23h 9.94 24.69 16.22 1.31 0.71 -0.61

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 13.18 13.24 9.94 0.01 -0.41 -0.41
Ebov 6.7 9.13 24.69 0.45 1.88 1.44
Marv 9.77 8.19 16.22 -0.25 0.73 0.99

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 29.56 27.55 43.27 -0.1 0.55 0.65
7h 34.58 56.85 42.31 0.72 0.29 -0.43
23h 93.84 81.84 126.08 -0.2 0.43 0.62

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 29.56 34.58 93.84 0.23 1.67 1.44
Ebov 27.55 56.85 81.84 1.05 1.57 0.53
Marv 43.27 42.31 126.08 -0.03 1.54 1.58