IFIH1

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
IFIH1	MDA-5, Hlcd, MDA5, IDDM19	interferon induced with helicase C domain 1	NM_022168	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	2	3	2	2	4	5	2	2	4
Read_Max		R. aegyptiacus	Transcriptome	5	8	11	3	14	9	5	16	15
Read_Max		R. aegyptiacus	Genome	6	5	9	5	5	5	4	10	15
DESeq		H. sapiens	Genome	13.18	13.24	9.94	6.7	9.13	24.69	9.77	8.19	16.22
DESeq		R. aegyptiacus	Transcriptome	29.56	34.58	93.84	27.55	56.85	81.84	43.27	42.31	126.08
DESeq		R. aegyptiacus	Genome	26.64	34.68	84.8	39.5	53.57	95.29	44.98	36.48	130.14

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	13.18	6.7	9.77	-0.98	-0.43	0.54
7h	13.24	9.13	8.19	-0.54	-0.69	-0.16
23h	9.94	24.69	16.22	1.31	0.71	-0.61

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	13.18	13.24	9.94	0.01	-0.41	-0.41
Ebov	6.7	9.13	24.69	0.45	1.88	1.44
Marv	9.77	8.19	16.22	-0.25	0.73	0.99

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	29.56	27.55	43.27	-0.1	0.55	0.65
7h	34.58	56.85	42.31	0.72	0.29	-0.43
23h	93.84	81.84	126.08	-0.2	0.43	0.62

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	29.56	34.58	93.84	0.23	1.67	1.44
Ebov	27.55	56.85	81.84	1.05	1.57	0.53
Marv	43.27	42.31	126.08	-0.03	1.54	1.58