RAC1
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| RAC1 | TC-25,Ras-Related C3 Botulinum Toxin Substrate, p21-Rac1, Rac-1 | ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) | NM_018890 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
The protein encoded by this gene is a GTPase which belongs to the RAS superfamily of small GTP-binding proteins. Members of this superfamily appear to regulate a diverse array of cellular events, including the control of cell growth, cytoskeletal reorganization, and the activation of protein kinases. Two transcript variants encoding different isoforms have been found for this gene.
The gene is highly expressed in all conditions. There are about 300 reads in the third intron of the bat cells transcript.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 1498 | 1100 | 949 | 1196 | 1302 | 1579 | 1367 | 1220 | 1137 |
Read_Max |  | R. aegyptiacus | Transcriptome | NA | NA | NA | NA | NA | NA | NA | NA | NA |
Read_Max |  | R. aegyptiacus | Genome | 1320 | 1023 | 628 | 949 | 693 | 600 | 951 | 1265 | 1331 |
DESeq | | H. sapiens | Genome | 6572.76 | 4477.22 | 4646.43 | 5128.37 | 4412.07 | 6700.36 | 5065.98 | 3887.44 | 5902.03 |
DESeq | | R. aegyptiacus | Transcriptome | NA | NA | NA | NA | NA | NA | NA | NA | NA |
DESeq | | R. aegyptiacus | Genome | 9100.94 | 7307.87 | 6580.86 | 8898.21 | 7616.5 | 8528.24 | 9862.15 | 7058.01 | 7375.24 |