NRF1
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| NRF1 | EWG, ALPHA-PAL | nuclear respiratory factor 1 | NM_001040110 |  |
NONE |  |
 |
Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
Homo sapiens nuclear respiratory factor 1 (NRF1), transcript variant 1, mRNA. This gene encodes a protein that homodimerizes and functions as a transcription factor which activates the expression of some key metabolic genes regulating cellular growth and nuclear genes required for respiration, heme biosynthesis, and mitochondrial DNA transcription and replication. The protein has also been associated with the regulation of neurite outgrowth. Alternative splicing results in multiple transcript variants.
Some expression upstream of 5'-UTR in all samples.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 82 | 91 | 55 | 71 | 73 | 63 | 105 | 92 | 48 |
Read_Max |  | R. aegyptiacus | Transcriptome | 166 | 135 | 56 | 93 | 98 | 98 | 96 | 101 | 87 |
Read_Max |  | R. aegyptiacus | Genome | 179 | 92 | 54 | 134 | 83 | 58 | 85 | 127 | 103 |
DESeq | | H. sapiens | Genome | 1268.47 | 1002.52 | 970.99 | 1237.5 | 1030.2 | 985.31 | 1242.24 | 984.2 | 829.56 |
DESeq | | R. aegyptiacus | Transcriptome | 908.35 | 867.84 | 467.63 | 729.87 | 682.15 | 678.52 | 857.55 | 734.67 | 582.68 |
DESeq | | R. aegyptiacus | Genome | 2072.85 | 1858.23 | 1747.31 | 1870.29 | 1774.65 | 1700.95 | 2035.4 | 1747.65 | 1574.54 |