TGFBR1

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
TGFBR1	ALK-5, ACVRLK4	transforming growth factor, beta receptor 1		pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	137	115	97	134	139	68	162	108	91
Read_Max		R. aegyptiacus	Transcriptome	612	472	245	382	316	468	497	463	423
Read_Max		R. aegyptiacus	Genome	828	389	290	554	258	291	444	569	474
DESeq		H. sapiens	Genome	2868.79	2303.87	2448.31	2957.65	2504.08	1430.09	2843.14	1867.48	2293.13
DESeq		R. aegyptiacus	Transcriptome	5114.09	4026.6	3205.09	3860.54	3910.47	4723.11	5980.18	4031.24	3587.31
DESeq		R. aegyptiacus	Genome	11407.54	8872.21	7220.2	9826.45	9561.92	12199.06	15019.25	9604.95	8877.0

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	2868.79	2957.65	2843.14	0.04	-0.01	-0.06
7h	2303.87	2504.08	1867.48	0.12	-0.3	-0.42
23h	2448.31	1430.09	2293.13	-0.78	-0.09	0.68

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	2868.79	2303.87	2448.31	-0.32	-0.23	0.09
Ebov	2957.65	2504.08	1430.09	-0.24	-1.05	-0.81
Marv	2843.14	1867.48	2293.13	-0.61	-0.31	0.3

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	5114.09	3860.54	5980.18	-0.41	0.23	0.63
7h	4026.6	3910.47	4031.24	-0.04	0.0	0.04
23h	3205.09	4723.11	3587.31	0.56	0.16	-0.4

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	5114.09	4026.6	3205.09	-0.34	-0.67	-0.33
Ebov	3860.54	3910.47	4723.11	0.02	0.29	0.27
Marv	5980.18	4031.24	3587.31	-0.57	-0.74	-0.17