MIP
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| MIP | CTRCT15, AQP0, LIM1, MIP26,MP26 | major intrinsic protein of lens fiber | NM_012064 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
Major intrinsic protein is a member of the water-transporting aquaporins as well as the original member of the MIP family of channel proteins. The function of the fiber cell membrane protein encoded by this gene is undetermined, yet this protein is speculated to play a role in intracellular communication. The MIP protein is expressed in the ocular lens and is required for correct lens function. This gene has been mapped among aquaporins AQP2, AQP5, and AQP6, in a potential gene cluster at 12q13.
This gene shows week uniform expression in all probes.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 2 | 0 | 1 | 0 | 1 | 0 | 2 | 0 | 1 |
Read_Max |  | R. aegyptiacus | Transcriptome | 1 | NA | NA | NA | NA | NA | 2 | 3 | 2 |
Read_Max |  | R. aegyptiacus | Genome | 7 | 2 | 3 | 1 | 3 | 2 | 4 | 6 | 2 |
DESeq | | H. sapiens | Genome | 5.06 | 1.0 | 2.99 | 1.0 | 2.63 | 1.0 | 3.63 | 1.0 | 3.17 |
DESeq | | R. aegyptiacus | Transcriptome | 1.84 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 5.45 | 4.3 | 2.75 |
DESeq | | R. aegyptiacus | Genome | 12.03 | 5.48 | 8.93 | 1.97 | 13.39 | 7.83 | 15.74 | 14.27 | 5.14 |