IFI35
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| IFI35 | IFP35, interferon-induced protein 35 | interferon-induced protein 35 | NM_005533 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
The cDNA encodes a 282-amino acid predicted protein containing a leucine zipper motif at the amino terminus. Unlike most other leucine zipper proteins, IFP35 lacks a basic domain associated with DNA binding. Western blots indicated that the IFP35 gene product can form homodimers and that there was increased nuclear localization following interferon treatment (omim.org).
The gene is slightly expressed in human cells and was not found to be expressed in bat cells.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 10 | 9 | 8 | 5 | 12 | 8 | 7 | 16 | 12 |
Read_Max |  | R. aegyptiacus | Transcriptome | 16 | 9 | 8 | 10 | 11 | 7 | 10 | 13 | 15 |
Read_Max |  | R. aegyptiacus | Genome | 29 | 25 | 15 | 27 | 16 | 16 | 14 | 42 | 25 |
DESeq | | H. sapiens | Genome | 36.52 | 36.7 | 30.78 | 16.97 | 30.27 | 22.05 | 22.93 | 51.36 | 54.28 |
DESeq | | R. aegyptiacus | Transcriptome | 47.21 | 24.6 | 35.2 | 32.13 | 29.47 | 30.51 | 28.81 | 38.18 | 45.61 |
DESeq | | R. aegyptiacus | Genome | 305.94 | 334.04 | 272.25 | 293.28 | 214.3 | 237.58 | 265.39 | 352.86 | 238.88 |