MAPK13

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
MAPK13 SAPK4, p38sigma, p38delta mitogen-activated protein kinase 13 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

This gene encodes a member of the mitogen-activated protein (MAP) kinase family. MAP kinases act as an integration point for multiple biochemical signals, and are involved in a wide variety of cellular processes such as proliferation, differentiation, transcription regulation and development. The encoded protein is a p38 MAP kinase and is activated by proinflammatory cytokines and cellular stress. Substrates of the encoded protein include the transcription factor ATF2 and the microtubule dynamics regulator stathmin. Alternatively spliced transcript variants have been observed for this gene.

Very lowly expressed in bat cells and human cells.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome2 2 2 4 3 6 15 3 11
Read_Max
batR. aegyptiacusTranscriptome 1 1 4 NA NA 2 NA 1 4
Read_Max
bat_genomeR. aegyptiacusGenome 2 2 4 1 0 2 1 1 7
DESeq
humanH. sapiensGenome 10.13 9.16 9.94 10.13 11.57 27.32 20.3 8.19 54.28
DESeq
batR. aegyptiacusTranscriptome 2.68 2.82 9.55 1.0 1.0 3.57 1.0 2.65 7.12
DESeq
bat_genomeR. aegyptiacusGenome 3.44 2.74 17.85 1.97 0.0 5.22 1.12 3.17 30.82

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 10.13 10.13 20.3 0.0 1.0 1.0
7h 9.16 11.57 8.19 0.34 -0.16 -0.5
23h 9.94 27.32 54.28 1.46 2.45 0.99

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 10.13 9.16 9.94 -0.15 -0.03 0.12
Ebov 10.13 11.57 27.32 0.19 1.43 1.24
Marv 20.3 8.19 54.28 -1.31 1.42 2.73

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 2.68 1.0 1.0 -1.42 -1.42 0.0
7h 2.82 1.0 2.65 -1.5 -0.09 1.41
23h 9.55 3.57 7.12 -1.42 -0.42 1.0

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 2.68 2.82 9.55 0.07 1.83 1.76
Ebov 1.0 1.0 3.57 0.0 1.84 1.84
Marv 1.0 2.65 7.12 1.41 2.83 1.43