STAT2
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| STAT2 | STAT2, ISGF-3, P113, STAT113,STAT113 | signal transducer and activator of transcription 2, 113kDa | NM_005419 | ![]() |
Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
The protein encoded by this gene is a member of the STAT protein family. In response to cytokines and growth factors, STAT family members are phosphorylated by the receptor associated kinases, and then form homo- or heterodimers that translocate to the cell nucleus where they act as transcription activators. In response to interferon (IFN), this protein forms a complex with STAT1 and IFN regulatory factor family protein p48 (ISGF3G), in which this protein acts as a transactivator, but lacks the ability to bind DNA directly. Transcription adaptor P300/CBP (EP300/CREBBP) has been shown to interact specifically with this protein, which is thought to be involved in the process of blocking IFN-alpha response by adenovirus. Multiple transcript variants encoding different isoforms have been found for this gene.
This gene is expressed in all probes in human cells and bat cells. It tends to be upregulated in the infected and non-infected probes after 7 h in human cells, but downregulated in bat cells. The exception is the the Marburg infected bat cells probe, where it is also upregulated after 7h.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max | H. sapiens | Genome | 45 | 76 | 75 | 42 | 88 | 42 | 52 | 76 | 79 | |
Read_Max | R. aegyptiacus | Transcriptome | 74 | 71 | 74 | 67 | 53 | 50 | 51 | 84 | 82 | |
Read_Max | R. aegyptiacus | Genome | 98 | 78 | 64 | 64 | 56 | 26 | 41 | 95 | 90 | |
DESeq | H. sapiens | Genome | 992.45 | 1488.99 | 1478.32 | 931.8 | 1366.76 | 702.39 | 936.98 | 1366.29 | 1527.64 | |
DESeq | R. aegyptiacus | Transcriptome | 537.01 | 577.38 | 697.28 | 678.59 | 635.06 | 425.73 | 490.46 | 713.19 | 577.43 | |
DESeq | R. aegyptiacus | Genome | 912.67 | 1204.74 | 1241.86 | 1013.16 | 1045.82 | 780.64 | 871.51 | 1195.76 | 1061.68 |
