ISG20

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
ISG20 CD25, HEM45,HEM45, CD25 interferon stimulated exonuclease gene 20kDa NM_002201 pdf NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens interferon stimulated exonuclease gene 20kDa (ISG20).

Expression levels are very low in both organisms. %%%%%%%%%%%%%%%%%%%%%

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome7 8 7 7 8 42 15 13 19
Read_Max
batR. aegyptiacusTranscriptome 1 NA NA NA 9 NA 1 2 2
Read_Max
bat_genomeR. aegyptiacusGenome 10 14 22 11 8 11 7 26 33
DESeq
humanH. sapiensGenome 51.74 44.85 55.61 55.75 46.53 220.76 65.04 70.54 132.57
DESeq
batR. aegyptiacusTranscriptome 1.84 1.0 1.0 1.0 10.86 1.0 2.11 2.65 2.75
DESeq
bat_genomeR. aegyptiacusGenome 105.7 138.73 293.45 140.22 174.12 234.97 103.46 198.24 250.86

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 51.74 55.75 65.04 0.11 0.33 0.22
7h 44.85 46.53 70.54 0.05 0.65 0.6
23h 55.61 220.76 132.57 1.99 1.25 -0.74

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 51.74 44.85 55.61 -0.21 0.1 0.31
Ebov 55.75 46.53 220.76 -0.26 1.99 2.25
Marv 65.04 70.54 132.57 0.12 1.03 0.91

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1.84 1.0 2.11 -0.88 0.2 1.08
7h 1.0 10.86 2.65 3.44 1.41 -2.03
23h 1.0 1.0 2.75 0.0 1.46 1.46

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1.84 1.0 1.0 -0.88 -0.88 0.0
Ebov 1.0 10.86 1.0 3.44 0.0 -3.44
Marv 2.11 2.65 2.75 0.33 0.38 0.05