VPS33A
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| VPS33A | vacuolar protein sorting 33 homolog A (S. cerevisiae) |  |
 |
NONE |  |
Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
Vesicle mediated protein sorting plays an important role in segregation of intracellular molecules into distinct organelles. Genetic studies in yeast have identified more than 40 vacuolar protein sorting (VPS) genes involved in vesicle transport to vacuoles. This gene is a member of the Sec-1 domain family, and it encodes a protein similar to the yeast class C Vps33 protein.
The expression levels of control group differ from the values of Ebola group in human cells.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 188 | 188 | 174 | 184 | 273 | 198 | 256 | 255 | 185 |
Read_Max |  | R. aegyptiacus | Transcriptome | NA | NA | NA | NA | NA | NA | NA | NA | NA |
Read_Max |  | R. aegyptiacus | Genome | 122 | 118 | 70 | 92 | 84 | 57 | 82 | 175 | 154 |
DESeq | | H. sapiens | Genome | 2403.0 | 2167.21 | 2030.33 | 2247.01 | 2324.41 | 1803.81 | 2295.77 | 2024.96 | 2099.58 |
DESeq | | R. aegyptiacus | Transcriptome | NA | NA | NA | NA | NA | NA | NA | NA | NA |
DESeq | | R. aegyptiacus | Genome | 1360.41 | 1607.24 | 1380.22 | 1486.16 | 1645.18 | 1114.82 | 1380.93 | 1699.28 | 1332.23 |