GAS6

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
GAS6 AXSF, AXLLG, FLJ34709, DKFZp666G247 growth arrest-specific 6 NM_000820 pdf NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

This gene encodes a gamma-carboxyglutamic acid (Gla)-containing protein thought to be involved in the stimulation of cell proliferation. This gene is frequently overexpressed in many cancers and has been implicated as an adverse prognostic marker. Elevated protein levels are additionally associated with a variety of disease states, including venous thromboembolic disease, systemic lupus erythematosus, chronic renal failure, and preeclampsia.

For this gene, no expression was observed in all probes.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome1 0 2 1 2 0 0 0 0
Read_Max
batR. aegyptiacusTranscriptome 9 16 31 12 11 7 9 16 20
Read_Max
bat_genomeR. aegyptiacusGenome 13 11 29 13 10 5 8 19 26
DESeq
humanH. sapiensGenome 2.01 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
DESeq
batR. aegyptiacusTranscriptome 57.29 73.62 215.99 50.45 74.37 48.48 76.64 81.97 106.84
DESeq
bat_genomeR. aegyptiacusGenome 103.99 114.09 300.14 153.06 137.28 79.63 140.57 153.04 197.78

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 2.01 1.0 1.0 -1.01 -1.01 0.0
7h 1.0 1.0 1.0 0.0 0.0 0.0
23h 1.0 1.0 1.0 0.0 0.0 0.0

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 2.01 1.0 1.0 -1.01 -1.01 0.0
Ebov 1.0 1.0 1.0 0.0 0.0 0.0
Marv 1.0 1.0 1.0 0.0 0.0 0.0

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 57.29 50.45 76.64 -0.18 0.42 0.6
7h 73.62 74.37 81.97 0.01 0.15 0.14
23h 215.99 48.48 106.84 -2.16 -1.02 1.14

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 57.29 73.62 215.99 0.36 1.91 1.55
Ebov 50.45 74.37 48.48 0.56 -0.06 -0.62
Marv 76.64 81.97 106.84 0.1 0.48 0.38