PARD6B
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| PARD6B | PAR-6B | par-6 family cell polarity regulator beta | NM_032521 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
Homo sapiens par-6 partitioning defective 6 homolog beta (C. elegans) (PARD6B) gene is a member of the PAR6 family and encodes a protein with a PSD95/Discs-large/ZO1 (PDZ) domain, an OPR domain and a semi-Cdc42/Rac interactive binding (CRIB) domain. This cytoplasmic protein is involved in asymmetrical cell division and cell polarization processes as a member of a multi-protein complex.
This gene is upregulated in all samples, especially during HG19 ebola infection after 7h and RAE until 7h.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 172 | 94 | 107 | 116 | 136 | 336 | 121 | 106 | 145 |
Read_Max |  | R. aegyptiacus | Transcriptome | 329 | 278 | 290 | 385 | 294 | 400 | 217 | 409 | 438 |
Read_Max |  | R. aegyptiacus | Genome | 328 | 383 | 229 | 258 | 228 | 231 | 181 | 451 | 482 |
DESeq | | H. sapiens | Genome | 2680.04 | 1605.26 | 1762.27 | 1725.71 | 1578.12 | 3901.39 | 1894.01 | 1368.69 | 2277.9 |
DESeq | | R. aegyptiacus | Transcriptome | 1509.05 | 1573.12 | 1979.89 | 2130.84 | 2199.94 | 2326.13 | 1705.21 | 2087.18 | 2279.62 |
DESeq | | R. aegyptiacus | Genome | 2465.59 | 3608.76 | 3110.79 | 2691.88 | 3651.99 | 4139.45 | 2918.16 | 3511.16 | 3860.57 |