RPS6KL1

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
RPS6KL1	MGC11287	ribosomal protein S6 kinase-like 1		pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens ribosomal protein S6 kinase-like 1 (RPS6KL1) gene is very low expressed. In HG19 infected with ebola it shows upregulation. In RAE no differencial gene expression could be observed.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	12	15	14	12	26	41	16	28	14
Read_Max		R. aegyptiacus	Transcriptome	5	4	8	5	7	9	4	6	9
Read_Max		R. aegyptiacus	Genome	14	9	12	9	6	16	6	14	32
DESeq		H. sapiens	Genome	156.26	258.01	167.79	215.45	216.43	486.58	229.07	286.37	194.55
DESeq		R. aegyptiacus	Transcriptome	15.28	9.17	41.31	13.82	21.81	27.95	8.79	21.66	42.11
DESeq		R. aegyptiacus	Genome	93.67	77.58	143.94	92.82	80.36	210.17	65.22	106.25	195.21

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	156.26	215.45	229.07	0.46	0.55	0.09
7h	258.01	216.43	286.37	-0.25	0.15	0.4
23h	167.79	486.58	194.55	1.54	0.21	-1.32

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	156.26	258.01	167.79	0.72	0.1	-0.62
Ebov	215.45	216.43	486.58	0.01	1.18	1.17
Marv	229.07	286.37	194.55	0.32	-0.24	-0.56

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	15.28	13.82	8.79	-0.14	-0.8	-0.65
7h	9.17	21.81	21.66	1.25	1.24	-0.01
23h	41.31	27.95	42.11	-0.56	0.03	0.59

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	15.28	9.17	41.31	-0.74	1.43	2.17
Ebov	13.82	21.81	27.95	0.66	1.02	0.36
Marv	8.79	21.66	42.11	1.3	2.26	0.96