MGRN1

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
MGRN1 RNF156,KIAA0544, RNF156 mahogunin ring finger 1, E3 ubiquitin protein ligase pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome297 226 170 231 274 383 272 305 175
Read_Max
batR. aegyptiacusTranscriptome 119 130 117 127 108 108 76 181 158
Read_Max
bat_genomeR. aegyptiacusGenome 119 136 97 125 90 62 58 208 167
DESeq
humanH. sapiensGenome 5086.1 3536.9 2800.77 4032.17 3234.11 5473.92 3963.33 3633.25 2998.82
DESeq
batR. aegyptiacusTranscriptome 993.21 1180.09 1273.84 1195.03 1057.76 1042.94 712.94 1121.34 1160.86
DESeq
bat_genomeR. aegyptiacusGenome 1491.9 1631.88 1687.06 1889.06 1555.89 1527.33 1170.64 1641.4 1663.58

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 5086.1 4032.17 3963.33 -0.34 -0.36 -0.02
7h 3536.9 3234.11 3633.25 -0.13 0.04 0.17
23h 2800.77 5473.92 2998.82 0.97 0.1 -0.87

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 5086.1 3536.9 2800.77 -0.52 -0.86 -0.34
Ebov 4032.17 3234.11 5473.92 -0.32 0.44 0.76
Marv 3963.33 3633.25 2998.82 -0.13 -0.4 -0.28

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 993.21 1195.03 712.94 0.27 -0.48 -0.75
7h 1180.09 1057.76 1121.34 -0.16 -0.07 0.08
23h 1273.84 1042.94 1160.86 -0.29 -0.13 0.15

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 993.21 1180.09 1273.84 0.25 0.36 0.11
Ebov 1195.03 1057.76 1042.94 -0.18 -0.2 -0.02
Marv 712.94 1121.34 1160.86 0.65 0.7 0.05