ADAMTS2
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| ADAMTS2 | NPI, PNPI, PCINP, PCPNI, PCI-NP, PC I-NP, ADAM-TS2, ADAMTS-2, ADAMTS-3,ADAMTS-3, hPCPNI, NPI | ADAM metallopeptidase with thrombospondin type 1 motif, 2 | NM_014244 |  |
NONE |  |
NONE |
Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
This gene encodes a member of the ADAMTS (a disintegrin and metalloproteinase with thrombospondin motifs) protein family. Members of the family share several distinct protein modules, including a propeptide region, a metalloproteinase domain, a disintegrin-like domain, and a thrombospondin type 1 (TS) motif. Individual members of this family differ in the number of C-terminal TS motifs, and some have unique C-terminal domains. The enzyme encoded by this gene excises the N-propeptide of type I, type II and type V procollagens. Mutations in this gene cause Ehlers-Danlos syndrome type VIIC, a recessively inherited connective-tissue disorder. Alternative splicing results in multiple transcript variants.
No expression in human cells and in the bat cells homolog. Something is expressed slightly directly 5' to the human cells gene (not annotated as a gene). No gene-expression plot was done for the gene, because there is nothing to see and it covers about 240kb.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 5 | 1 | 6 | 1 | 5 | 11 | 4 | 5 | 4 |
Read_Max |  | R. aegyptiacus | Transcriptome | NA | NA | NA | NA | 2 | 2 | NA | NA | 1 |
Read_Max |  | R. aegyptiacus | Genome | NA | NA | NA | NA | NA | NA | NA | NA | NA |
DESeq | | H. sapiens | Genome | 1.0 | 1.0 | 1.99 | 1.0 | 1.0 | 2.32 | 1.88 | 1.0 | 1.0 |
DESeq | | R. aegyptiacus | Transcriptome | 1.0 | 1.0 | 1.0 | 1.0 | 5.38 | 3.57 | 1.0 | 1.0 | 1.87 |
DESeq | | R. aegyptiacus | Genome | NA | NA | NA | NA | NA | NA | NA | NA | NA |