DICER1
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| DICER1 | HERNA, MNG1, KIAA0928, RMSE2,Dicer, K12H4.8-LIKE, HERNA | dicer 1, ribonuclease type III |  |
 |
 |
 |
Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
Homo sapiens dicer 1, ribonuclease type III (DICER1), transcript variant 3, mRNA. This gene encodes a protein possessing an RNA helicase motif containing a DEXH box in its amino terminus and an RNA motif in the carboxy terminus. The encoded protein functions as a ribonuclease and is required by the RNA interference and small temporal RNA (stRNA) pathways to produce the active small RNA component that represses gene expression. Alternative splicing results in multiple transcript variants.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 155 | 117 | 99 | 88 | 142 | 65 | 106 | 92 | 64 |
Read_Max |  | R. aegyptiacus | Transcriptome | 154 | 120 | 88 | 115 | 107 | 127 | 93 | 145 | 112 |
Read_Max |  | R. aegyptiacus | Genome | 147 | 121 | 70 | 83 | 96 | 59 | 95 | 175 | 127 |
DESeq | | H. sapiens | Genome | 4173.8 | 3658.26 | 3582.12 | 3283.89 | 4158.43 | 1859.08 | 2929.99 | 2797.93 | 2994.47 |
DESeq | | R. aegyptiacus | Transcriptome | 3028.03 | 2542.53 | 2561.34 | 2899.09 | 2873.42 | 2875.33 | 2833.19 | 2711.79 | 2459.81 |
DESeq | | R. aegyptiacus | Genome | 1442.92 | 1298.75 | 1264.18 | 1208.68 | 1555.89 | 1387.65 | 1333.7 | 1468.54 | 1146.44 |