EGF

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
EGF HOMG4, URG epidermal growth factor pdf

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Description

Homo sapiens epidermal growth factor (EGF). This gene encodes a member of the epidermal growth factor superfamily. The encoded protein is synthesized as a large precursor molecule that is proteolytically cleaved to generate the 53-amino acid epidermal growth factor peptide. This protein acts a potent mitogenic factor that plays an important role in the growth, proliferation and differentiation of numerous cell types.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome20 30 28 17 43 15 23 30 80
Read_Max
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
Read_Max
bat_genomeR. aegyptiacusGenome 2 0 1 2 2 2 2 1 1
DESeq
humanH. sapiensGenome 302.39 425.27 541.1 335.22 451.37 139.17 457.15 546.96 2201.79
DESeq
batR. aegyptiacusTranscriptome 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
DESeq
bat_genomeR. aegyptiacusGenome 1.72 0.0 4.46 3.95 4.46 5.22 3.37 1.59 5.14

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 302.39 335.22 457.15 0.15 0.6 0.45
7h 425.27 451.37 546.96 0.09 0.36 0.28
23h 541.1 139.17 2201.79 -1.96 2.02 3.98

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 302.39 425.27 541.1 0.49 0.84 0.35
Ebov 335.22 451.37 139.17 0.43 -1.27 -1.7
Marv 457.15 546.96 2201.79 0.26 2.27 2.01

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1.0 1.0 1.0 0.0 0.0 0.0
7h 1.0 1.0 1.0 0.0 0.0 0.0
23h 1.0 1.0 1.0 0.0 0.0 0.0

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1.0 1.0 1.0 0.0 0.0 0.0
Ebov 1.0 1.0 1.0 0.0 0.0 0.0
Marv 1.0 1.0 1.0 0.0 0.0 0.0