FLNA

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
FLNA FLNA, ABP-280, ABPX, CSBS, CVD1, FLN, FLN-A, FLN1, FMD, MNS, NHBP, OPD, OPD1, OPD2, XLVD, XMVD,ABP-280 filamin A, alpha pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Promotes orthogonal branching of actin filaments and links actin filaments to membrane glycoproteins. Anchors various transmembrane proteins to the actin cytoskeleton and serves as a scaffold for a wide range of cytoplasmic signaling proteins.

Highly but not differentially expressed in human cells. Its bat cells homolog seems to be induced due to Marburg vius infection.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome519 642 368 529 648 1399 774 1023 825
Read_Max
batR. aegyptiacusTranscriptome 3522 2689 2328 2737 2772 3016 2489 3246 4153
Read_Max
bat_genomeR. aegyptiacusGenome 3648 2710 1912 2481 2226 1727 2055 3782 4481
DESeq
humanH. sapiensGenome 22245.13 21497.88 11832.49 21581.58 17977.78 47640.02 25589.94 28598.56 32581.17
DESeq
batR. aegyptiacusTranscriptome 74050.14 65548.91 57983.68 62050.35 67140.97 62671.59 71118.23 57977.7 70701.96
DESeq
bat_genomeR. aegyptiacusGenome 109643.56 85486.63 79712.28 102499.81 97734.26 98653.75 113904.98 78542.89 104285.0

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 22245.13 21581.58 25589.94 -0.04 0.2 0.25
7h 21497.88 17977.78 28598.56 -0.26 0.41 0.67
23h 11832.49 47640.02 32581.17 2.01 1.46 -0.55

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 22245.13 21497.88 11832.49 -0.05 -0.91 -0.86
Ebov 21581.58 17977.78 47640.02 -0.26 1.14 1.41
Marv 25589.94 28598.56 32581.17 0.16 0.35 0.19

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 74050.14 62050.35 71118.23 -0.26 -0.06 0.2
7h 65548.91 67140.97 57977.7 0.03 -0.18 -0.21
23h 57983.68 62671.59 70701.96 0.11 0.29 0.17

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 74050.14 65548.91 57983.68 -0.18 -0.35 -0.18
Ebov 62050.35 67140.97 62671.59 0.11 0.01 -0.1
Marv 71118.23 57977.7 70701.96 -0.29 -0.01 0.29