MAP4K2

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
MAP4K2 MAP4K2, BL44, GCK, RAB8IP,GCK mitogen-activated protein kinase kinase kinase kinase 2 NM_004579 pdf

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Description

Serine/threonine-protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Acts as a MAPK kinase kinase kinase (MAP4K) and is an upstream activator of the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway and to a lesser extend of the p38 MAPKs signaling pathway. Required for the efficient activation of JNKs by TRAF6-dependent stimuli, including pathogen-associated molecular patterns (PAMPs) such as polyinosine-polycytidine (poly(IC)), lipopolysaccharides (LPS), lipid A, peptidoglycan (PGN), or bacterial flagellin. To a lesser degree, IL-1 and engagement of CD40 also stimulate MAP4K2-mediated JNKs activation. The requirement for MAP4K2/GCK is most pronounced for LPS signaling, and extends to LPS stimulation of c-Jun phosphorylation and induction of IL-8. Enhances MAP3K1 oligomerization, which may relieve N-terminal mediated MAP3K1 autoinhibition and lead to activation following autophosphorylation. Mediates also the SAP/JNK signaling pathway and the p38 MAPKs signaling pathway through activation of the MAP3Ks MAP3K10/MLK2 and MAP3K11/MLK3. May play a role in the regulation of vesicle targeting or fusion. regulation of vesicle targeting or fusion.

Its expression seems to be mostly unaffected by Ebola or Marburg virus infection. Some low abundant exons seem to be consistently excluded in the isoform formation due to Ebola virus infection, in contrast to mock treated or Marburg virus infected samples.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome17 24 14 14 18 16 17 18 17
Read_Max
batR. aegyptiacusTranscriptome 29 39 26 31 34 25 18 50 39
Read_Max
bat_genomeR. aegyptiacusGenome 33 30 24 32 31 15 14 53 43
DESeq
humanH. sapiensGenome 134.95 184.58 150.92 147.01 143.27 114.17 135.21 170.46 158.67
DESeq
batR. aegyptiacusTranscriptome 290.01 316.88 321.04 272.95 266.01 216.57 231.27 347.18 329.02
DESeq
bat_genomeR. aegyptiacusGenome 537.12 522.06 617.03 534.23 531.28 382.49 413.83 609.78 512.0

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 134.95 147.01 135.21 0.12 0.0 -0.12
7h 184.58 143.27 170.46 -0.37 -0.11 0.25
23h 150.92 114.17 158.67 -0.4 0.07 0.47

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 134.95 184.58 150.92 0.45 0.16 -0.29
Ebov 147.01 143.27 114.17 -0.04 -0.36 -0.33
Marv 135.21 170.46 158.67 0.33 0.23 -0.1

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 290.01 272.95 231.27 -0.09 -0.33 -0.24
7h 316.88 266.01 347.18 -0.25 0.13 0.38
23h 321.04 216.57 329.02 -0.57 0.04 0.6

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 290.01 316.88 321.04 0.13 0.15 0.02
Ebov 272.95 266.01 216.57 -0.04 -0.33 -0.3
Marv 231.27 347.18 329.02 0.59 0.51 -0.08