ITGB8
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| ITGB8 | integrin, beta 8 | NM_002214 |  |
NONE | NONE | NONE |
Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
This gene is a member of the integrin beta chain family and encodes a single-pass type I membrane protein with a VWFA domain and four cysteine-rich repeats. This protein noncovalently binds to an alpha subunit to form a heterodimeric integrin complex. In general, integrin complexes mediate cell-cell and cell-extracellular matrix interactions and this complex plays a role in human airway epithelial proliferation. Alternatively spliced variants which encode different protein isoforms have been described; however, not all variants have been fully characterized.
The expression level of this gene in human samples is very low, no homolog was found in bats
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 5 | 4 | 17 | 5 | 6 | 15 | 8 | 6 | 3 |
Read_Max |  | R. aegyptiacus | Transcriptome | 119 | 73 | 70 | 87 | 61 | 48 | 56 | 78 | 58 |
Read_Max |  | R. aegyptiacus | Genome | 108 | 89 | 58 | 63 | 53 | 23 | 72 | 116 | 68 |
DESeq | | H. sapiens | Genome | 74.06 | 56.07 | 70.5 | 72.86 | 69.29 | 185.23 | 56.26 | 58.55 | 58.63 |
DESeq | | R. aegyptiacus | Transcriptome | 878.11 | 683.58 | 716.82 | 675.85 | 652.58 | 270.47 | 691.8 | 585.13 | 462.85 |
DESeq | | R. aegyptiacus | Genome | 2752.63 | 2339.21 | 2150.1 | 2337.37 | 2276.91 | 907.26 | 2563.93 | 2135.4 | 1503.47 |