TRADD

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
TRADD Hs.89862 TNFRSF1A-associated via death domain pdf NONE NONE NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The protein encoded by this gene is a death domain containing adaptor molecule that interacts with TNFRSF1A/TNFR1 and mediates programmed cell death signaling and NF-kappaB activation. This protein binds adaptor protein TRAF2, reduces the recruitment of inhibitor-of-apoptosis proteins (IAPs) by TRAF2, and thus suppresses TRAF2 mediated apoptosis. This protein can also interact with receptor TNFRSF6/FAS and adaptor protein FADD/MORT1, and is involved in the Fas-induced cell death pathway.

Expression values are not available. %%%%%%%%%%%%%%%%%%%%%

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome6 6 8 7 9 11 7 11 10
Read_Max
batR. aegyptiacusTranscriptome 7 4 3 6 7 6 5 7 14
Read_Max
bat_genomeR. aegyptiacusGenome 41 46 26 30 22 13 19 45 40
DESeq
humanH. sapiensGenome 52.75 117.27 131.06 64.88 77.42 72.06 86.97 140.09 115.17
DESeq
batR. aegyptiacusTranscriptome 24.52 20.97 18.1 25.72 29.47 16.4 22.14 24.96 31.61
DESeq
bat_genomeR. aegyptiacusGenome 404.77 434.44 405.03 394.01 313.63 227.14 309.25 396.47 396.42

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 52.75 64.88 86.97 0.3 0.72 0.42
7h 117.27 77.42 140.09 -0.6 0.26 0.86
23h 131.06 72.06 115.17 -0.86 -0.19 0.68

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 52.75 117.27 131.06 1.15 1.31 0.16
Ebov 64.88 77.42 72.06 0.25 0.15 -0.1
Marv 86.97 140.09 115.17 0.69 0.41 -0.28

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 24.52 25.72 22.14 0.07 -0.15 -0.22
7h 20.97 29.47 24.96 0.49 0.25 -0.24
23h 18.1 16.4 31.61 -0.14 0.8 0.95

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 24.52 20.97 18.1 -0.23 -0.44 -0.21
Ebov 25.72 29.47 16.4 0.2 -0.65 -0.85
Marv 22.14 24.96 31.61 0.17 0.51 0.34