GNG12

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
GNG12 guanine nucleotide binding protein (G protein), gamma 12 pdf

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Description

Homo sapiens guanine nucleotide binding protein (G protein), gamma 12(GNG12), mRNA.

The gene is upregulated in human cells 23 h after Ebola infection. The bat cellshomolog is slightly upregulated in 23 h after Marburg.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome190 163 221 144 245 271 186 204 270
Read_Max
batR. aegyptiacusTranscriptome 405 283 231 289 274 282 287 362 426
Read_Max
bat_genomeR. aegyptiacusGenome 451 396 296 409 275 190 316 517 579
DESeq
humanH. sapiensGenome 2576.53 2028.51 3122.44 2332.56 2360.18 3271.07 2172.96 1930.63 4792.94
DESeq
batR. aegyptiacusTranscriptome 836.1 712.63 775.45 737.2 804.8 734.98 877.58 740.46 884.46
DESeq
bat_genomeR. aegyptiacusGenome 5412.44 5311.83 4966.33 4983.83 5443.38 5216.42 6761.81 5461.02 6293.01

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 2576.53 2332.56 2172.96 -0.14 -0.25 -0.1
7h 2028.51 2360.18 1930.63 0.22 -0.07 -0.29
23h 3122.44 3271.07 4792.94 0.07 0.62 0.55

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 2576.53 2028.51 3122.44 -0.35 0.28 0.62
Ebov 2332.56 2360.18 3271.07 0.02 0.49 0.47
Marv 2172.96 1930.63 4792.94 -0.17 1.14 1.31

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 836.1 737.2 877.58 -0.18 0.07 0.25
7h 712.63 804.8 740.46 0.18 0.06 -0.12
23h 775.45 734.98 884.46 -0.08 0.19 0.27

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 836.1 712.63 775.45 -0.23 -0.11 0.12
Ebov 737.2 804.8 734.98 0.13 -0.0 -0.13
Marv 877.58 740.46 884.46 -0.25 0.01 0.26