CXCL10

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
CXCL10	Gamma-IP10, IP-10,IFI10, crg-2, mob-1, C7, gIP-10	chemokine (C-X-C motif) ligand 10		pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Chemotactic for monocytes and T-lymphocytes. Does not show a clear pattern, because of low quantity of reads in it. Gene is upstream of CXCL11, and the annotations for CXCL10 and CXCL11 are merged.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	2	0	0	1	1	0	4	0	2
Read_Max		R. aegyptiacus	Transcriptome	NA	NA	NA	NA	NA	NA	NA	NA	NA
Read_Max		R. aegyptiacus	Genome	0	0	0	0	0	0	0	0	0
DESeq		H. sapiens	Genome	3.03	1.0	1.0	3.28	2.63	1.0	6.26	1.0	7.52
DESeq		R. aegyptiacus	Transcriptome	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0
DESeq		R. aegyptiacus	Genome	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	3.03	3.28	6.26	0.11	1.05	0.93
7h	1.0	2.63	1.0	1.4	0.0	-1.4
23h	1.0	1.0	7.52	0.0	2.91	2.91

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	3.03	1.0	1.0	-1.6	-1.6	0.0
Ebov	3.28	2.63	1.0	-0.32	-1.71	-1.4
Marv	6.26	1.0	7.52	-2.65	0.26	2.91

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1.0	1.0	1.0	0.0	0.0	0.0
7h	1.0	1.0	1.0	0.0	0.0	0.0
23h	1.0	1.0	1.0	0.0	0.0	0.0

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1.0	1.0	1.0	0.0	0.0	0.0
Ebov	1.0	1.0	1.0	0.0	0.0	0.0
Marv	1.0	1.0	1.0	0.0	0.0	0.0