FOXO1
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| FOXO1 | FKH1 | forkhead box O1 | NM_002015 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
This gene belongs to the forkhead family of transcription factors which are characterized by a distinct forkhead domain. The specific function of this gene has not yet been determined; however, it may play a role in myogenic growth and differentiation. Translocation of this gene with PAX3 has been associated with alveolar rhabdomyosarcoma.
The gene is not expressed in human cells but slightly in bat cells.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 58 | 57 | 62 | 60 | 92 | 102 | 75 | 89 | 78 |
Read_Max |  | R. aegyptiacus | Transcriptome | 146 | 98 | 61 | 69 | 81 | 66 | 74 | 71 | 63 |
Read_Max |  | R. aegyptiacus | Genome | 169 | 72 | 49 | 79 | 63 | 40 | 66 | 90 | 72 |
DESeq | | H. sapiens | Genome | 1042.17 | 1072.89 | 1246.99 | 1007.08 | 1061.9 | 1405.09 | 1009.79 | 1042.55 | 1293.86 |
DESeq | | R. aegyptiacus | Transcriptome | 1008.33 | 814.29 | 602.0 | 624.57 | 563.88 | 443.7 | 873.13 | 555.39 | 489.96 |
DESeq | | R. aegyptiacus | Genome | 1436.9 | 1062.37 | 951.76 | 1336.07 | 1038.0 | 793.69 | 1447.27 | 1076.03 | 873.32 |