CHMP5
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| CHMP5 | HSPC177, CGI-34, Vps60 | charged multivesicular body protein 5 | NM_016410 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
CHMP5 belongs to the chromatin-modifying protein/charged multivesicular body protein (CHMP) family. These proteins are components of ESCRT-III (endosomal sorting complex required for transport III), a complex involved in degradation of surface receptor proteins and formation of endocytic multivesicular bodies (MVBs).
The gene is stronger expressed in bat cells than in human cells.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 109 | 169 | 172 | 128 | 204 | 257 | 193 | 215 | 152 |
Read_Max |  | R. aegyptiacus | Transcriptome | 286 | 287 | 243 | 255 | 248 | 276 | 231 | 320 | 319 |
Read_Max |  | R. aegyptiacus | Genome | 313 | 257 | 198 | 263 | 212 | 166 | 198 | 373 | 364 |
DESeq | | H. sapiens | Genome | 687.0 | 745.51 | 835.97 | 678.57 | 814.76 | 908.99 | 772.94 | 720.42 | 814.34 |
DESeq | | R. aegyptiacus | Transcriptome | 1167.11 | 1217.3 | 1277.51 | 1277.44 | 1292.11 | 1136.62 | 1262.47 | 1269.23 | 1154.74 |
DESeq | | R. aegyptiacus | Genome | 1411.98 | 1513.23 | 1411.46 | 1467.4 | 1564.82 | 1489.47 | 1567.6 | 1522.46 | 1355.35 |