ARL13B

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
ARL13B	DKFZp761H079, JBTS8	ADP-ribosylation factor-like 13B	NM_182896	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens syntaxin 19.

The human cells gene is downregulated at late time points during viral infection but not in mock infection.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	115	106	93	110	166	89	127	129	57
Read_Max		R. aegyptiacus	Transcriptome	148	116	71	103	91	78	119	110	85
Read_Max		R. aegyptiacus	Genome	136	102	60	115	65	48	106	140	96
DESeq		H. sapiens	Genome	1492.74	1135.1	1084.17	1350.43	1229.37	944.52	1186.1	1020.97	837.17
DESeq		R. aegyptiacus	Transcriptome	947.0	893.26	594.67	716.14	773.04	663.12	928.75	725.58	606.3
DESeq		R. aegyptiacus	Genome	1423.15	1207.48	939.48	1356.8	1186.45	1009.08	1456.27	1237.79	973.49

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1492.74	1350.43	1186.1	-0.14	-0.33	-0.19
7h	1135.1	1229.37	1020.97	0.12	-0.15	-0.27
23h	1084.17	944.52	837.17	-0.2	-0.37	-0.17

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1492.74	1135.1	1084.17	-0.4	-0.46	-0.07
Ebov	1350.43	1229.37	944.52	-0.14	-0.52	-0.38
Marv	1186.1	1020.97	837.17	-0.22	-0.5	-0.29

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	947.0	716.14	928.75	-0.4	-0.03	0.38
7h	893.26	773.04	725.58	-0.21	-0.3	-0.09
23h	594.67	663.12	606.3	0.16	0.03	-0.13

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	947.0	893.26	594.67	-0.08	-0.67	-0.59
Ebov	716.14	773.04	663.12	0.11	-0.11	-0.22
Marv	928.75	725.58	606.3	-0.36	-0.62	-0.26