TMEM67

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
TMEM67 MGC26979, JBTS6, NPHP11 transmembrane protein 67 NM_153704 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The protein encoded by this gene localizes to the primary cilium and to the plasma membrane. The gene functions in centriole migration to the apical membrane and formation of the primary cilium. Multiple transcript variants encoding different isoforms have been found for this gene.

The gene is not expressed in human cells and slightly in bat cells.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome11 10 6 6 8 10 7 14 12
Read_Max
batR. aegyptiacusTranscriptome 103 73 71 79 65 119 66 104 88
Read_Max
bat_genomeR. aegyptiacusGenome 166 138 98 102 73 100 84 201 126
DESeq
humanH. sapiensGenome 91.32 53.01 75.46 75.14 73.35 72.06 54.51 88.13 94.51
DESeq
batR. aegyptiacusTranscriptome 1118.39 1057.55 1326.37 1116.28 1030.38 1554.93 1118.97 1258.49 1118.0
DESeq
bat_genomeR. aegyptiacusGenome 2283.4 2628.53 2783.87 2118.15 2194.32 3029.86 2292.92 2819.72 2196.13

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 91.32 75.14 54.51 -0.28 -0.74 -0.46
7h 53.01 73.35 88.13 0.47 0.73 0.26
23h 75.46 72.06 94.51 -0.07 0.32 0.39

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 91.32 53.01 75.46 -0.78 -0.28 0.51
Ebov 75.14 73.35 72.06 -0.03 -0.06 -0.03
Marv 54.51 88.13 94.51 0.69 0.79 0.1

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1118.39 1116.28 1118.97 -0.0 0.0 0.0
7h 1057.55 1030.38 1258.49 -0.04 0.25 0.29
23h 1326.37 1554.93 1118.0 0.23 -0.25 -0.48

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1118.39 1057.55 1326.37 -0.08 0.25 0.33
Ebov 1116.28 1030.38 1554.93 -0.12 0.48 0.59
Marv 1118.97 1258.49 1118.0 0.17 -0.0 -0.17