TPT1

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
TPT1 TCTP, fortilin tumor protein, translationally-controlled 1 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens tumor protein, translationally-controlled 1 (TPT1).

The gene is very strongly expressed in human cells and bat cells.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome2151 2379 3729 2142 3817 4267 2652 2928 3814
Read_Max
batR. aegyptiacusTranscriptome 3415 3183 3484 2925 2838 3448 3214 3811 5325
Read_Max
bat_genomeR. aegyptiacusGenome 3885 3135 3021 3119 2421 2084 2826 4733 6090
DESeq
humanH. sapiensGenome 8854.0 8982.0 12124.38 9089.96 9418.22 11795.61 9043.23 8419.76 12638.15
DESeq
batR. aegyptiacusTranscriptome 8698.97 9473.65 11479.78 8608.28 9027.83 9450.35 10870.32 8948.84 11510.42
DESeq
bat_genomeR. aegyptiacusGenome 8863.75 8827.49 10680.22 10337.97 9386.69 9816.68 11329.66 8878.62 11454.13

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 8854.0 9089.96 9043.23 0.04 0.03 -0.01
7h 8982.0 9418.22 8419.76 0.07 -0.09 -0.16
23h 12124.38 11795.61 12638.15 -0.04 0.06 0.1

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 8854.0 8982.0 12124.38 0.02 0.45 0.43
Ebov 9089.96 9418.22 11795.61 0.05 0.38 0.32
Marv 9043.23 8419.76 12638.15 -0.1 0.48 0.59

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 8698.97 8608.28 10870.32 -0.02 0.32 0.34
7h 9473.65 9027.83 8948.84 -0.07 -0.08 -0.01
23h 11479.78 9450.35 11510.42 -0.28 0.0 0.28

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 8698.97 9473.65 11479.78 0.12 0.4 0.28
Ebov 8608.28 9027.83 9450.35 0.07 0.13 0.07
Marv 10870.32 8948.84 11510.42 -0.28 0.08 0.36