PDE6D

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
PDE6D	JBTS22, PDED	phosphodiesterase 6D, cGMP-specific, rod, delta		pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The phosphodiesterase 6D, cGMP-specific, rod, delta is involved in the purine metabolism.

No particular expression pattern was identified in the samples.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	33	31	42	35	36	47	47	37	61
Read_Max		R. aegyptiacus	Transcriptome	107	129	78	110	89	119	93	128	141
Read_Max		R. aegyptiacus	Genome	109	102	63	106	73	64	74	149	144
DESeq		H. sapiens	Genome	264.84	198.86	254.17	248.53	248.14	254.97	211.53	213.63	275.01
DESeq		R. aegyptiacus	Transcriptome	305.97	324.14	314.93	351.7	362.38	339.76	411.48	357.1	397.24
DESeq		R. aegyptiacus	Genome	586.96	553.09	561.24	580.64	552.49	481.7	608.37	554.27	596.77

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	264.84	248.53	211.53	-0.09	-0.32	-0.23
7h	198.86	248.14	213.63	0.32	0.1	-0.22
23h	254.17	254.97	275.01	0.0	0.11	0.11

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	264.84	198.86	254.17	-0.41	-0.06	0.35
Ebov	248.53	248.14	254.97	-0.0	0.04	0.04
Marv	211.53	213.63	275.01	0.01	0.38	0.36

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	305.97	351.7	411.48	0.2	0.43	0.23
7h	324.14	362.38	357.1	0.16	0.14	-0.02
23h	314.93	339.76	397.24	0.11	0.33	0.23

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	305.97	324.14	314.93	0.08	0.04	-0.04
Ebov	351.7	362.38	339.76	0.04	-0.05	-0.09
Marv	411.48	357.1	397.24	-0.2	-0.05	0.15