PDE6D

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
PDE6D JBTS22, PDED phosphodiesterase 6D, cGMP-specific, rod, delta pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The phosphodiesterase 6D, cGMP-specific, rod, delta is involved in the purine metabolism.

No particular expression pattern was identified in the samples.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome33 31 42 35 36 47 47 37 61
Read_Max
batR. aegyptiacusTranscriptome 107 129 78 110 89 119 93 128 141
Read_Max
bat_genomeR. aegyptiacusGenome 109 102 63 106 73 64 74 149 144
DESeq
humanH. sapiensGenome 264.84 198.86 254.17 248.53 248.14 254.97 211.53 213.63 275.01
DESeq
batR. aegyptiacusTranscriptome 305.97 324.14 314.93 351.7 362.38 339.76 411.48 357.1 397.24
DESeq
bat_genomeR. aegyptiacusGenome 586.96 553.09 561.24 580.64 552.49 481.7 608.37 554.27 596.77

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 264.84 248.53 211.53 -0.09 -0.32 -0.23
7h 198.86 248.14 213.63 0.32 0.1 -0.22
23h 254.17 254.97 275.01 0.0 0.11 0.11

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 264.84 198.86 254.17 -0.41 -0.06 0.35
Ebov 248.53 248.14 254.97 -0.0 0.04 0.04
Marv 211.53 213.63 275.01 0.01 0.38 0.36

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 305.97 351.7 411.48 0.2 0.43 0.23
7h 324.14 362.38 357.1 0.16 0.14 -0.02
23h 314.93 339.76 397.24 0.11 0.33 0.23

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 305.97 324.14 314.93 0.08 0.04 -0.04
Ebov 351.7 362.38 339.76 0.04 -0.05 -0.09
Marv 411.48 357.1 397.24 -0.2 -0.05 0.15