ARAP3

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
ARAP3 AK001579, B3KMD0, B3KMD0_HUMAN,FLJ21065, DRAG1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 NM_022481 pdf NONE NONE NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

This gene encodes a phosphoinositide binding protein containing ARF-GAP, RHO-GAP, RAS-associating, and pleckstrin homology domains. The ARF-GAP and RHO-GAP domains cooperate in mediating rearrangements in the cell cytoskeleton and cell shape. It is a specific PtdIns(3,4,5)P3/PtdIns(3,4)P2-stimulated Arf6-GAP protein.

The gene is not differential expressed.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome3 6 3 3 3 6 3 4 6
Read_Max
batR. aegyptiacusTranscriptome 68 66 52 54 44 68 39 56 90
Read_Max
bat_genomeR. aegyptiacusGenome 83 66 49 84 44 48 44 90 110
DESeq
humanH. sapiensGenome 24.34 45.87 18.87 13.55 24.58 39.16 29.07 32.17 60.8
DESeq
batR. aegyptiacusTranscriptome 1044.45 996.74 1287.28 1190.45 1121.28 1376.57 940.98 1202.31 1686.56
DESeq
bat_genomeR. aegyptiacusGenome 1389.63 1664.74 1930.3 1406.18 1616.16 1866.74 1328.07 1694.53 2256.07

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 24.34 13.55 29.07 -0.85 0.26 1.1
7h 45.87 24.58 32.17 -0.9 -0.51 0.39
23h 18.87 39.16 60.8 1.05 1.69 0.63

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 24.34 45.87 18.87 0.91 -0.37 -1.28
Ebov 13.55 24.58 39.16 0.86 1.53 0.67
Marv 29.07 32.17 60.8 0.15 1.06 0.92

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1044.45 1190.45 940.98 0.19 -0.15 -0.34
7h 996.74 1121.28 1202.31 0.17 0.27 0.1
23h 1287.28 1376.57 1686.56 0.1 0.39 0.29

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1044.45 996.74 1287.28 -0.07 0.3 0.37
Ebov 1190.45 1121.28 1376.57 -0.09 0.21 0.3
Marv 940.98 1202.31 1686.56 0.35 0.84 0.49