PIK3C3
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| PIK3C3 | VPS34, hVps34,Vps34 | phosphatidylinositol 3-kinase, catalytic subunit type 3 | NM_002647 |  |
 |
 |
 |
Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
The phosphatidylinositol 3-kinase, catalytic subunit type 3 (EC:2.7.1.137) is involved in the inositol phosphate metabolism, Phosphatidylinositol signaling system, Regulation of autophagy, Phagosome and Tuberculosis.
No particular differential gene expression pattern found in the samples analyzed. %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\igvfigure{ \beginfigure[H] \centering \includegraphics[width=\textwidth]../../input/holy_folders/hg19.goi.01204/snapshots//hg19.goi.01204_igv_left.eps % \includegraphics[width=\textwidth]../../input/holy_folders/hg19.goi.01204/snapshots//hg19.goi.01204_igv_middle.eps % \includegraphics[width=\textwidth]../../input/holy_folders/hg19.goi.01204/snapshots//hg19.goi.01204_igv_right.eps % \caption\igv of gene PIK3C3. % <- say something about the figure here \endfigure }
\sashimifigure{ \beginfigure[H] \centering \includegraphics[width=\textwidth]../../input/holy_folders/hg19.goi.01204/snapshots//hg19.goi.01204_sashimi.eps % \caption\sashimi of gene PIK3C3. % <- say something about the figure here \endfigure }
\ucscfigure{ \beginfigure[H] \centering \includegraphics[width=\textwidth]../../input/holy_folders/hg19.goi.01204/snapshots//hg19.goi.01204_ucsc.eps % \caption\ucsc of gene PIK3C3. % <- say something about the figure here \endfigure }
\setcounterfigure0 \enddocument
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 43 | 59 | 57 | 39 | 71 | 123 | 51 | 57 | 49 |
Read_Max |  | R. aegyptiacus | Transcriptome | 90 | 77 | 57 | 64 | 68 | 53 | 47 | 67 | 46 |
Read_Max |  | R. aegyptiacus | Genome | 78 | 57 | 31 | 58 | 41 | 21 | 39 | 79 | 43 |
DESeq | | H. sapiens | Genome | 575.37 | 686.35 | 800.22 | 611.27 | 798.5 | 1094.53 | 601.01 | 563.74 | 757.79 |
DESeq | | R. aegyptiacus | Transcriptome | 792.41 | 702.64 | 670.4 | 745.44 | 842.03 | 546.35 | 786.36 | 807.38 | 533.7 |
DESeq | | R. aegyptiacus | Genome | 724.47 | 712.81 | 576.86 | 715.93 | 729.95 | 578.3 | 808.54 | 786.6 | 551.39 |