ZFYVE20

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
ZFYVE20 Rabenosyn-5 pdf NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The zinc finger, FYVE domain containing 20 is involved in endocytosis.

It does not particularly seem to be differentially expressed.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome178 180 243 184 274 188 253 221 266
Read_Max
batR. aegyptiacusTranscriptome 144 117 81 92 103 109 85 141 95
Read_Max
bat_genomeR. aegyptiacusGenome NA NA NA NA NA NA NA NA NA
DESeq
humanH. sapiensGenome 4485.34 4479.26 4741.74 4497.57 4765.7 3880.34 4447.55 4454.18 4747.27
DESeq
batR. aegyptiacusTranscriptome 1492.25 1362.53 1527.92 1444.09 1554.93 1474.09 1470.49 1429.51 1216.85
DESeq
bat_genomeR. aegyptiacusGenome NA NA NA NA NA NA NA NA NA

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 4485.34 4497.57 4447.55 0.0 -0.01 -0.02
7h 4479.26 4765.7 4454.18 0.09 -0.01 -0.1
23h 4741.74 3880.34 4747.27 -0.29 0.0 0.29

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 4485.34 4479.26 4741.74 -0.0 0.08 0.08
Ebov 4497.57 4765.7 3880.34 0.08 -0.21 -0.3
Marv 4447.55 4454.18 4747.27 0.0 0.09 0.09

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1492.25 1444.09 1470.49 -0.05 -0.02 0.03
7h 1362.53 1554.93 1429.51 0.19 0.07 -0.12
23h 1527.92 1474.09 1216.85 -0.05 -0.33 -0.28

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1492.25 1362.53 1527.92 -0.13 0.03 0.17
Ebov 1444.09 1554.93 1474.09 0.11 0.03 -0.08
Marv 1470.49 1429.51 1216.85 -0.04 -0.27 -0.23